IGBMC : Institut de la Génétique et de la Biologie Moléculaire et Cellulaire

• Chercheurs

  Hinrich GRONEMEYER

• Post-Doctorants

  Akinchan KUMAR

• Ingénieurs & Techniciens

  Cathie ERB

Génomique fonctionnelle et cancer

Biologie des systèmes des décisions du destin cellulaire dans les cellules normales et tumorales

Publications

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• Epimetheus - a multi-profile normalizer for epigenomic sequencing data.

  Saleem MM(1), Mendoza-Parra MA(2,)(3,)(4,)(5), Cholley PE(1), Blum M(1), Gronemeyer H(6,)(7,)(8,)(9).

  BMC Bioinformatics 12 mai 2017;18:259.

• The KDM5 family is required for activation of pro-proliferative cell cycle genes during adipocyte differentiation.

  Brier AB(1), Loft A(1), Madsen JGS(1,)(2), Rosengren T(1), Nielsen R(1), Schmidt SF(1), Liu Z(3), Yan Q(3), Gronemeyer H(4), Mandrup S(1).

  Nucleic Acids Res 28 février 2017;45:1743-1759.

• Time-Lapse Fluorescence Microscopy of Budding Yeast Cells.

  Kumar A(1)(2), Mendoza M(3)(4).

  Methods Mol Biol 2016;1369:1-8.

• LOGIQA: a database dedicated to long-range genome interactions quality assessment.

  Mendoza-Parra MA(1,)(2,)(3,)(4,)(5), Blum M(6,)(7,)(8,)(9,)(10), Malysheva V(6,)(7,)(8,)(9,)(10), Cholley PE(6,)(7,)(8,)(9,)(10), Gronemeyer H(11,)(12,)(13,)(14,)(15).

  BMC Genomics 16 mai 2016;17:355.

• Reconstructed cell fate-regulatory programs in stem cells reveal hierarchies and key factors of neurogenesis.

  Mendoza-Parra MA(1), Malysheva V(1), Mohamed Saleem MA(1), Lieb M(1), Godel A(1), Gronemeyer H(1).

  Genome Res Nov 2016;26:1505-1519.

• Antibody performance in ChIP-sequencing assays: From quality scores of public data sets to quantitative certification.

  Mendoza-Parra MA1, Saravaki V1, Cholley PE1, Blum M1, Billoré B1, Gronemeyer H1.

  Version 2. F1000Res. jan 2016;11:54.

• Reconstruction of gene regulatory networks reveals chromatin remodelers and key transcription factors in tumorigenesis.

  Malysheva V(1), Mendoza-Parra MA(1), Saleem MA(1), Gronemeyer H(2).

  Genome Med 19 mai 2016;8:57.

• NGS-QC Generator: A Quality Control System for ChIP-Seq and Related Deep Sequencing-Generated Datasets.

  Mendoza-Parra MA(1), Saleem MA(2), Blum M(2), Cholley PE(2), Gronemeyer H(2).

  Methods Mol Biol 2016;1418:243-65.