
Chromatin and epigenetic regulation
Chromatin and epigenetic regulation
The main research activity of our group is to study the role of histone variants and their deposition machineries in the epigenetic control of human genome activity at the genome- wide level. Among the various epigenetic memory mechanisms, the local replacement of canonical histones within the nucleosome by variant histones has the potential to affect considerably the activity of the corresponding genomic regions. Indeed, nucleosomes bearing histone variants have distinct structures and functional activities in vitro and some histone variants are incorporated at specific genomic locations. Our laboratory is focusing on the role of histone variants in gene regulation and genome integrity. We have recently implicated macroH2A in PARP-1 enzymatic activity and transcription regulation (Ouararhni et al., 2006), and discovered a new link between histone variants, transcription factors and non- coding RNA (unpublished results). This association with transcription factors and non-coding RNA is novel and will certainly help us to understand how chromatin domains are established and how epigenetic information is stored and transmitted to daughter cells. Alteration of these epigenetic marks is associated with developmental disorders and cancer.
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News

The quaternary structure of the GR highlights inter-domain allosteric communication
In inflammatory or autoimmune diseases, modulating the action of the glucocorticoid receptor (GR) is an effective therapeutic strategy. However, the…
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Publications
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2024
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Identification of a novel DNA oxidative damage repair pathway, requiring the ubiquitination of the histone variant macroH2A1.1
- Khalid Ouararhni
- Flore Mietton
- Jamal Sabir
- Abdulkhaleg Ibrahim
- Annie Molla
- Raed Albheyri
- Ali Zari
- Ahmed Bahieldin
- Hervé Menoni
- Christian Bronner
- Stefan Dimitrov
- Ali Hamiche
BMC Biology ; Volume: 22 ; Page: 188
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H2A.Z is involved in premature aging and DSB repair initiation in muscle fibers
- Edwige Belotti
- Nicolas Lacoste
- Arslan Iftikhar
- Thomas Simonet
- Christophe Papin
- Alexis Osseni
- Nathalie Streichenberger
- Pierre-Olivier Mari
- Emmanuelle Girard
- Mohamed Graies
- Giuseppina Giglia-Mari
- Stefan Dimitrov
- Ali Hamiche
- Laurent Schaeffer
Nucleic Acids Research ; Volume: 52 ; Page: 3031-3049
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Identification and Characterization of HIRIP3 as a Histone H2A Chaperone
- Maria Ignatyeva
- Abdul Kareem Mohideen Patel
- Abdulkhaleg Ibrahim
- Raed Albiheyri
- Ali Zari
- Ahmed Bahieldin
- Christian Bronner
- Jamal Sabir
- Ali Hamiche
Cells ; Volume: 13 ; Page: 273
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Development of a mouse embryonic stem cell model for investigating the functions of the linker histone H1 ‐4
- Abed Alkarem Abu Alhaija
- Imtiaz Nisar Lone
- Esin Ozkuru Sekeroglu
- Tugce Batur
- Dimitar Angelov
- Stefan Dimitrov
- Ali Hamiche
- Elif Nur Firat Karalar
- Muhammed Erdem Ercan
- Tamer Yagci
- Hani Alotaibi
- Muhammed Kasim Diril
FEBS Open Bio
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2023
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MBD4 loss results in global reactivation of promoters and retroelements with low methylated CpG density
- Christophe Papin
- Abdulkhaleg Ibrahim
- Jamal Sabir
- Stéphanie Le Gras
- Isabelle Stoll
- Raed Albiheyri
- Ali Zari
- Ahmed Bahieldin
- Alfonso Bellacosa
- Christian Bronner
- Ali Hamiche
Journal of experimental & clinical cancer research ; Volume: 42 ; Page: 301
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The CENP-A nucleosome: where and when it happens during the inner kinetochore’s assembly
- Seyit Kale
- Ramachandran Boopathi
- Edwige Belotti
- Imtiaz Nisar Lone
- Mohamed Graies
- Maria Schröder
- Maria Petrova
- Christophe Papin
- Jan Bednar
- Iva Ugrinova
- Ali Hamiche
- Stefan Dimitrov
Trends in Biochemical Sciences ; Volume: 48 ; Page: 849-859
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Natural and Synthetic Anticancer Epidrugs Targeting the Epigenetic Integrator UHRF1
- Waseem Ashraf
- Tanveer Ahmad
- Nicolas Reynoird
- Ali Hamiche
- Yves Mély
- Christian Bronner
- Marc Mousli
Molecules ; Volume: 28 ; Page: 5997
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Molecular Mechanism of Nucleosome Recognition by the Pioneer Transcription Factor Sox
- Burcu Ozden
- Ramachandran Boopathi
- Ayşe Berçin Barlas
- Imtiaz Lone
- Jan Bednar
- Carlo Petosa
- Seyit Kale
- Ali Hamiche
- Dimitar Angelov
- Stefan Dimitrov
- Ezgi Karaca
Journal of Chemical Information and Modeling ; Volume: 63 ; Page: 3839-3853
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Molecular Mechanism of Nucleosome Recognition by the Pioneer Transcription Factor Sox
- Burcu Ozden
- Ramachandran Boopathi
- Ayşe Berçin Barlas
- Imtiaz Lone
- Jan Bednar
- Carlo Petosa
- Seyit Kale
- Ali Hamiche
- Dimitar Angelov
- Stefan Dimitrov
- Ezgi Karaca
Journal of Chemical Information and Modeling ; Volume: 63 ; Page: 3839-3853
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Nucleosome dyad determines the H1 C-terminus collapse on distinct DNA arms
- Jaime Alegrio Louro
- Ramachandran Boopathi
- Brice Beinsteiner
- Abdul Kareem Mohideen Patel
- Tat Cheung Cheng
- Dimitar Angelov
- Ali Hamiche
- Jan Bendar
- Seyit Kale
- Bruno P. Klaholz
- Stefan Dimitrov
Structure ; Volume: 31 ; Page: 201-212.e5
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